STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_024285Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
C5167_033852
MFAP1 domain-containing protein.
    
   0.890
C5167_003255
MFAP1 domain-containing protein.
    
   0.890
C5167_002845
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 
 0.853
C5167_046831
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 
 0.853
C5167_024439
Uncharacterized protein.
    
   0.850
C5167_034548
Uncharacterized protein.
    
   0.850
C5167_050483
Uncharacterized protein.
    
   0.850
C5167_034827
Mevalonate kinase.
   
 
 0.836
C5167_050725
Mevalonate kinase.
   
 
 0.836
C5167_044023
Uncharacterized protein.
    
   0.662
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (22%) [HD]