STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_025273Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
C5167_018793
Uncharacterized protein.
  
  
 
0.909
C5167_040415
Uncharacterized protein.
  
  
 
0.900
C5167_019274
CRM domain-containing protein.
     
  0.900
C5167_043155
CRM domain-containing protein.
     
  0.900
C5167_014181
Uncharacterized protein.
     
 0.640
C5167_051171
Uncharacterized protein.
     
 0.621
C5167_033577
Nudix hydrolase domain-containing protein.
     
 0.546
C5167_000431
Nudix hydrolase domain-containing protein.
     
 0.546
C5167_001141
Nudix hydrolase domain-containing protein.
     
 0.546
C5167_011057
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
      
 0.499
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.