STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_009681Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
C5167_045108
Protein kinase domain-containing protein.
   
 0.985
C5167_031562
Uncharacterized protein.
    
 0.944
C5167_044193
Uncharacterized protein.
    
 0.944
C5167_037634
Uncharacterized protein.
    
 0.938
C5167_035067
Uncharacterized protein.
    
 
 0.584
C5167_001094
Uncharacterized protein.
    
 
 0.584
C5167_002789
TPR_REGION domain-containing protein.
      
 0.536
C5167_047075
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
  
 0.524
C5167_013854
BFN domain-containing protein.
   
  
 0.512
C5167_031380
Uncharacterized protein.
      
 0.491
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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