STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_008722UmuC domain-containing protein. (728 aa)    
Predicted Functional Partners:
C5167_047075
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.997
C5167_038103
BRCT domain-containing protein.
   
 0.992
C5167_010657
Uncharacterized protein.
   
 0.992
C5167_021142
HORMA domain-containing protein.
   
 0.990
C5167_020352
Uncharacterized protein.
   
 0.989
C5167_014394
Uncharacterized protein.
   
 0.989
C5167_006491
Ubiquitin-like domain-containing protein.
    
  0.981
C5167_012369
Uncharacterized protein.
  
 
 0.956
C5167_039218
Uncharacterized protein.
    
 0.917
C5167_015369
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.917
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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