C5167_009599 protein (Papaver somniferum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C5167_009599

Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (832 aa)

Predicted Functional Partners:

C5167_036674

0.577

C5167_005829

0.577

C5167_011446

0.577

C5167_024074

0.574

C5167_031960

0.574

C5167_035386

0.574

C5167_040711

0.471

C5167_000775

0.471

C5167_017820

0.454

C5167_012523

0.454

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_000775	C5167_009599	A0A4Y7KTF3	A0A4Y7K1U0	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.471
C5167_000775	C5167_012523	A0A4Y7KTF3	A0A4Y7J0U0	Uncharacterized protein.	Uncharacterized protein; Belongs to the TPP enzyme family.	0.994
C5167_000775	C5167_017820	A0A4Y7KTF3	A0A4Y7IPJ3	Uncharacterized protein.	TPP_enzyme_N domain-containing protein.	0.998
C5167_000775	C5167_024074	A0A4Y7KTF3	A0A4Y7JQI5	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_000775	C5167_031960	A0A4Y7KTF3	A0A4Y7K644	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_000775	C5167_035386	A0A4Y7KTF3	A0A4Y7KIJ8	Uncharacterized protein.	Uncharacterized protein.	0.836
C5167_000775	C5167_040711	A0A4Y7KTF3	A0A4Y7IFS8	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_005829	C5167_009599	A0A4Y7JF34	A0A4Y7K1U0	UDP-glucose 6-dehydrogenase.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.577
C5167_005829	C5167_011446	A0A4Y7JF34	A0A4Y7K5Y8	UDP-glucose 6-dehydrogenase.	UDP-glucose 6-dehydrogenase.	0.900
C5167_005829	C5167_036674	A0A4Y7JF34	A0A4Y7I893	UDP-glucose 6-dehydrogenase.	UDP-glucose 6-dehydrogenase.	0.900
C5167_009599	C5167_000775	A0A4Y7K1U0	A0A4Y7KTF3	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.471
C5167_009599	C5167_005829	A0A4Y7K1U0	A0A4Y7JF34	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	UDP-glucose 6-dehydrogenase.	0.577
C5167_009599	C5167_011446	A0A4Y7K1U0	A0A4Y7K5Y8	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	UDP-glucose 6-dehydrogenase.	0.577
C5167_009599	C5167_012523	A0A4Y7K1U0	A0A4Y7J0U0	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein; Belongs to the TPP enzyme family.	0.454
C5167_009599	C5167_017820	A0A4Y7K1U0	A0A4Y7IPJ3	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	TPP_enzyme_N domain-containing protein.	0.454
C5167_009599	C5167_024074	A0A4Y7K1U0	A0A4Y7JQI5	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.574
C5167_009599	C5167_031960	A0A4Y7K1U0	A0A4Y7K644	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.574
C5167_009599	C5167_035386	A0A4Y7K1U0	A0A4Y7KIJ8	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.574
C5167_009599	C5167_036674	A0A4Y7K1U0	A0A4Y7I893	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	UDP-glucose 6-dehydrogenase.	0.577
C5167_009599	C5167_040711	A0A4Y7K1U0	A0A4Y7IFS8	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.471