STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_009921SCP domain-containing protein; Belongs to the CRISP family. (224 aa)    
Predicted Functional Partners:
C5167_003887
Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.
     
 0.614
C5167_042475
Chorismate_bind domain-containing protein.
      
 0.527
C5167_004670
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.
      
 0.493
C5167_013276
J domain-containing protein.
      
 0.455
C5167_016984
Uncharacterized protein.
   
  
 0.441
C5167_013863
Uncharacterized protein.
   
  
 0.441
C5167_017447
Barwin domain-containing protein.
   
  
 0.422
C5167_017253
Glyco_hydro_19_cat domain-containing protein.
   
  
 0.422
C5167_017445
Uncharacterized protein.
   
  
 0.422
C5167_008018
Uncharacterized protein.
   
  
 0.422
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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