STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_011471Uncharacterized protein. (393 aa)    
Predicted Functional Partners:
C5167_018541
Uncharacterized protein.
   
  0.912
C5167_013667
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
  0.879
C5167_002396
Uncharacterized protein.
   
  0.851
rps2
30S ribosomal protein S2, chloroplastic.
   
 0.769
C5167_038437
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
 0.769
C5167_038408
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
 0.769
C5167_023248
Uncharacterized protein.
   
 0.769
C5167_024262
MRP-S28 domain-containing protein.
   
  0.733
C5167_032061
MRP-S28 domain-containing protein.
   
  0.733
C5167_017079
Uncharacterized protein.
  
  0.723
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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