STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_033063Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
C5167_018024
PPM-type phosphatase domain-containing protein.
    
 0.867
C5167_021242
PPM-type phosphatase domain-containing protein.
    
 0.867
C5167_033855
PPM-type phosphatase domain-containing protein.
    
 0.847
C5167_000066
PPM-type phosphatase domain-containing protein.
    
 0.798
C5167_018608
PPM-type phosphatase domain-containing protein.
    
 0.712
C5167_019825
PPM-type phosphatase domain-containing protein.
    
 0.712
C5167_012551
PPM-type phosphatase domain-containing protein.
    
 0.677
C5167_031532
Uncharacterized protein.
    
 0.677
C5167_044182
PPM-type phosphatase domain-containing protein.
    
 0.677
C5167_044181
PPM-type phosphatase domain-containing protein.
    
 0.677
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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