C5167_032824 protein (Papaver somniferum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C5167_032824

Mannosyltransferase. (542 aa)

Predicted Functional Partners:

C5167_006403

0.966

C5167_021703

0.953

C5167_032894

0.953

C5167_049491

0.951

C5167_033943

0.903

C5167_044275

0.903

C5167_014202

0.900

C5167_032518

0.900

C5167_049233

0.900

C5167_049574

0.900

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_006403	C5167_021703	A0A4Y7JGE7	A0A4Y7JFN0	Uncharacterized protein.	Uncharacterized protein.	0.847
C5167_006403	C5167_032824	A0A4Y7JGE7	A0A4Y7K8P4	Uncharacterized protein.	Mannosyltransferase.	0.966
C5167_006403	C5167_032894	A0A4Y7JGE7	A0A4Y7KA51	Uncharacterized protein.	Uncharacterized protein.	0.847
C5167_006403	C5167_049233	A0A4Y7JGE7	A0A4Y7KK85	Uncharacterized protein.	Mannosyltransferase.	0.966
C5167_006403	C5167_049491	A0A4Y7JGE7	A0A4Y7KKZ3	Uncharacterized protein.	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	0.955
C5167_014202	C5167_032518	A0A4Y7J6H4	A0A4Y7K7P8	Uncharacterized protein.	Uncharacterized protein.	0.901
C5167_014202	C5167_032824	A0A4Y7J6H4	A0A4Y7K8P4	Uncharacterized protein.	Mannosyltransferase.	0.900
C5167_014202	C5167_033943	A0A4Y7J6H4	A0A4Y7K8K5	Uncharacterized protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.800
C5167_014202	C5167_044275	A0A4Y7J6H4	A0A4Y7LBX9	Uncharacterized protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.800
C5167_014202	C5167_049233	A0A4Y7J6H4	A0A4Y7KK85	Uncharacterized protein.	Mannosyltransferase.	0.900
C5167_014202	C5167_049491	A0A4Y7J6H4	A0A4Y7KKZ3	Uncharacterized protein.	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	0.900
C5167_014202	C5167_049574	A0A4Y7J6H4	A0A4Y7KMM6	Uncharacterized protein.	Uncharacterized protein.	0.901
C5167_021703	C5167_006403	A0A4Y7JFN0	A0A4Y7JGE7	Uncharacterized protein.	Uncharacterized protein.	0.847
C5167_021703	C5167_032824	A0A4Y7JFN0	A0A4Y7K8P4	Uncharacterized protein.	Mannosyltransferase.	0.953
C5167_021703	C5167_032894	A0A4Y7JFN0	A0A4Y7KA51	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_021703	C5167_049233	A0A4Y7JFN0	A0A4Y7KK85	Uncharacterized protein.	Mannosyltransferase.	0.953
C5167_021703	C5167_049491	A0A4Y7JFN0	A0A4Y7KKZ3	Uncharacterized protein.	GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.	0.455
C5167_032518	C5167_014202	A0A4Y7K7P8	A0A4Y7J6H4	Uncharacterized protein.	Uncharacterized protein.	0.901
C5167_032518	C5167_032824	A0A4Y7K7P8	A0A4Y7K8P4	Uncharacterized protein.	Mannosyltransferase.	0.900
C5167_032518	C5167_033943	A0A4Y7K7P8	A0A4Y7K8K5	Uncharacterized protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.800