STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_032752Uncharacterized protein; Belongs to the MT-A70-like family. (759 aa)    
Predicted Functional Partners:
C5167_013316
Uncharacterized protein; Belongs to the MT-A70-like family.
  
 
0.983
C5167_004608
Uncharacterized protein.
    
 0.980
C5167_006181
Uncharacterized protein.
   
 0.980
C5167_023402
Uncharacterized protein.
   
 0.980
C5167_048146
Uncharacterized protein.
    
 0.980
C5167_036585
Uncharacterized protein.
   
 
 0.933
C5167_003879
VIR_N domain-containing protein.
    
 
 0.775
C5167_046948
VIR_N domain-containing protein.
    
 
 0.775
C5167_048260
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.710
C5167_037814
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
   
  
 0.703
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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