STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_034947Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
C5167_037446
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.999
C5167_039218
Uncharacterized protein.
   
 0.922
C5167_015369
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.922
C5167_009284
Uncharacterized protein.
   
 0.922
C5167_009282
Uncharacterized protein.
   
 0.922
C5167_034020
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.922
C5167_003708
Ubiquitin-like domain-containing protein.
   
 0.922
C5167_046890
Ubiquitin-like domain-containing protein.
   
 0.922
C5167_047115
Ubiquitin-like domain-containing protein.
   
 0.922
C5167_047559
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.922
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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