STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_049686Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (243 aa)    
Predicted Functional Partners:
C5167_009682
TPR_REGION domain-containing protein.
     
 0.620
C5167_044009
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.571
C5167_032298
Uncharacterized protein.
    
 0.554
C5167_049878
Uncharacterized protein.
    
 0.554
C5167_033246
Uncharacterized protein.
   
 
 0.520
C5167_050335
Uncharacterized protein.
   
 
 0.520
C5167_017776
RING-type domain-containing protein.
     
 0.486
C5167_021033
RING-type domain-containing protein.
     
 0.486
C5167_012337
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.426
C5167_025643
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.426
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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