STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_000279Uncharacterized protein. (762 aa)    
Predicted Functional Partners:
C5167_049245
Uncharacterized protein.
    
 0.999
C5167_036985
Uncharacterized protein.
    
 0.951
C5167_013954
Uncharacterized protein.
    
 0.951
C5167_008480
Uncharacterized protein.
    
 0.951
C5167_050956
Uncharacterized protein.
    
 0.951
C5167_044053
Uncharacterized protein.
    
 0.951
C5167_043633
Uncharacterized protein.
    
 0.951
C5167_006100
Uncharacterized protein.
    
 
 0.943
C5167_022572
Uncharacterized protein.
    
 
 0.943
C5167_033803
Vacuolar protein sorting-associated protein 41 homolog; Required for vacuolar assembly and vacuolar traffic.
    
 
 0.943
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.