STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_045871J domain-containing protein. (286 aa)    
Predicted Functional Partners:
C5167_001665
Uncharacterized protein.
   
  
 0.628
C5167_045855
Uncharacterized protein.
   
  
 0.628
C5167_014018
Uncharacterized protein.
   
  
 0.521
C5167_023232
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
      
 0.507
C5167_013276
J domain-containing protein.
  
   
 0.499
C5167_048686
Uncharacterized protein.
      
 0.487
C5167_010089
J domain-containing protein.
  
     0.481
C5167_013372
WD_REPEATS_REGION domain-containing protein.
   
  
 0.468
C5167_024350
WD_REPEATS_REGION domain-containing protein.
   
  
 0.468
C5167_032420
RING-type domain-containing protein.
   
  
 0.444
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.