STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_045840Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
C5167_015528
HAUS-augmin3 domain-containing protein.
   
 0.991
C5167_034382
Uncharacterized protein.
   
 0.991
C5167_043339
Uncharacterized protein.
   
 0.974
C5167_042808
RRM domain-containing protein.
   
 0.974
C5167_006109
HAUS6_N domain-containing protein.
    
 0.961
C5167_022475
HAUS6_N domain-containing protein.
    
 0.961
C5167_046340
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
     
 0.825
C5167_039278
SUI1 domain-containing protein.
     
 0.817
C5167_009349
SUI1 domain-containing protein.
     
 0.817
C5167_005836
U1-type domain-containing protein.
    
 0.758
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (26%) [HD]