STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_047455BHLH domain-containing protein. (522 aa)    
Predicted Functional Partners:
C5167_032456
BHLH domain-containing protein.
    
0.905
C5167_049600
BHLH domain-containing protein.
    
0.905
C5167_040929
Tify domain-containing protein.
    
  0.901
C5167_006750
Tify domain-containing protein.
    
  0.901
C5167_022272
Tify domain-containing protein.
    
  0.901
C5167_005346
Tify domain-containing protein.
     
  0.900
C5167_023200
Tify domain-containing protein.
     
  0.900
C5167_011328
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
     
  0.900
C5167_013202
Uncharacterized protein.
      
 0.445
C5167_033705
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.429
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.