ALC56_15300 protein (Trachymyrmex septentrionalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALC56_15300

Insulin-like growth factor-binding protein complex acid labile subunit. (488 aa)

Predicted Functional Partners:

ALC56_12737

0.875

ALC56_10351

0.744

ALC56_10623

0.709

ALC56_12337

0.707

ALC56_12345

0.707

ALC56_12338

0.707

ALC56_12344

0.707

ALC56_02279

0.678

ALC56_11158

0.667

ALC56_13639

0.665

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_02279	ALC56_10351	A0A195FSB4	A0A195F4T1	Olfactomedin-like protein 2A.	Tyrosine-protein kinase-like 7.	0.659
ALC56_02279	ALC56_13639	A0A195FSB4	A0A195EVH4	Olfactomedin-like protein 2A.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.678
ALC56_02279	ALC56_15300	A0A195FSB4	A0A151JSQ2	Olfactomedin-like protein 2A.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.678
ALC56_10351	ALC56_02279	A0A195F4T1	A0A195FSB4	Tyrosine-protein kinase-like 7.	Olfactomedin-like protein 2A.	0.659
ALC56_10351	ALC56_10623	A0A195F4T1	A0A195F3R3	Tyrosine-protein kinase-like 7.	Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.	0.461
ALC56_10351	ALC56_12337	A0A195F4T1	A0A195EZ91	Tyrosine-protein kinase-like 7.	Peripheral plasma membrane protein CASK.	0.730
ALC56_10351	ALC56_12338	A0A195F4T1	A0A195EZT4	Tyrosine-protein kinase-like 7.	Peripheral plasma membrane protein CASK.	0.730
ALC56_10351	ALC56_12344	A0A195F4T1	A0A195F0E7	Tyrosine-protein kinase-like 7.	Peripheral plasma membrane protein CASK.	0.730
ALC56_10351	ALC56_12345	A0A195F4T1	A0A195EZJ0	Tyrosine-protein kinase-like 7.	Peripheral plasma membrane protein CASK.	0.730
ALC56_10351	ALC56_13639	A0A195F4T1	A0A195EVH4	Tyrosine-protein kinase-like 7.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.744
ALC56_10351	ALC56_15300	A0A195F4T1	A0A151JSQ2	Tyrosine-protein kinase-like 7.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.744
ALC56_10623	ALC56_10351	A0A195F3R3	A0A195F4T1	Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.	Tyrosine-protein kinase-like 7.	0.461
ALC56_10623	ALC56_13639	A0A195F3R3	A0A195EVH4	Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.709
ALC56_10623	ALC56_15300	A0A195F3R3	A0A151JSQ2	Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.709
ALC56_11158	ALC56_12737	A0A195F3K8	A0A195EXP6	Uncharacterized protein.	Calcium homeostasis endoplasmic reticulum protein.	0.999
ALC56_11158	ALC56_13639	A0A195F3K8	A0A195EVH4	Uncharacterized protein.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.667
ALC56_11158	ALC56_15300	A0A195F3K8	A0A151JSQ2	Uncharacterized protein.	Insulin-like growth factor-binding protein complex acid labile subunit.	0.667
ALC56_12337	ALC56_10351	A0A195EZ91	A0A195F4T1	Peripheral plasma membrane protein CASK.	Tyrosine-protein kinase-like 7.	0.730
ALC56_12337	ALC56_12338	A0A195EZ91	A0A195EZT4	Peripheral plasma membrane protein CASK.	Peripheral plasma membrane protein CASK.	0.993
ALC56_12337	ALC56_12344	A0A195EZ91	A0A195F0E7	Peripheral plasma membrane protein CASK.	Peripheral plasma membrane protein CASK.	0.977