STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_15056WD repeat-containing protein 6. (1064 aa)    
Predicted Functional Partners:
ALC56_11183
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.985
ALC56_10128
Putative ribosomal RNA methyltransferase CG11447.
   
 
 0.955
ALC56_10487
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.940
ALC56_04343
U3 small nucleolar RNA-associated protein 15 like protein.
   
    0.918
ALC56_03722
Nucleolar protein 56.
   
    0.895
ALC56_01351
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.881
ALC56_12067
Histone chaperone asf1.
   
    0.858
ALC56_07973
Uncharacterized protein.
   
   0.828
ALC56_11870
WD repeat-containing protein 36.
   
    0.818
ALC56_15179
Ribosomal_L7Ae domain-containing protein.
   
    0.815
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.