Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_15010DNA_pol_B_2 domain-containing protein. (791 aa)    
Predicted Functional Partners:
ALC56_03914
Uncharacterized protein.
  
     0.536
ALC56_13599
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
  0.530
ALC56_08720
DNA polymerase zeta catalytic subunit.
     
  0.530
ALC56_05043
Mitotic spindle assembly checkpoint protein MAD2B.
     
  0.530
ALC56_02787
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
     
  0.530
ALC56_14288
Protein lin-52 like protein.
    
 0.491
ALC56_00474
Protein lin-54 like protein.
    
 0.486
ALC56_11244
Putative histone-binding protein Caf1.
    
 0.476
ALC56_07442
Protein lin-9 like protein.
    
 0.470
ALC56_03549
Transcription factor E2F5.
    
 0.465
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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