Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALC56_15090Carboxypeptidase M. (494 aa)    
Predicted Functional Partners:
ALC56_05741
DNA-directed RNA polymerase III subunit RPC8.
    
 
 0.791
ALC56_04928
Cyclin-G-associated kinase.
     
  0.702
ALC56_06765
Neuroendocrine convertase 2; Belongs to the peptidase S8 family.
   
  
 0.644
ALC56_02282
Phosphatidylinositol-binding clathrin assembly protein LAP.
     
 0.639
ALC56_08928
Transcription factor HNF-4 like protein.
      
 0.638
ALC56_14365
Neurexin-4.
   
   0.612
ALC56_02357
Neurexin-4.
   
   0.612
ALC56_08816
TBC1 domain family member 9.
     
  0.610
ALC56_00440
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.606
ALC56_08968
Clathrin heavy chain.
     
  0.601
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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