Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_15083Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
ALC56_13701
Speckle-type POZ protein.
   
  0.524
ALC56_13700
Speckle-type POZ protein.
   
  0.524
ALC56_13702
Speckle-type POZ protein.
   
  0.524
ALC56_12972
Protein roadkill.
   
  0.524
ALC56_12973
Protein roadkill.
   
  0.524
ALC56_11934
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.523
ALC56_06222
Putative ATP-dependent RNA helicase DHX34.
    
 0.478
ALC56_11260
Suppressor of fused homolog.
    
 0.476
ALC56_13858
cAMP-dependent protein kinase catalytic subunit; Belongs to the protein kinase superfamily.
    
 0.471
ALC56_07667
CREB-binding protein.
    
 0.471
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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