Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_15331Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
ALC56_06405
Uncharacterized protein.
  
     0.503
ALC56_10566
Uncharacterized protein.
  
     0.466
ALC56_15008
Uncharacterized protein.
  
     0.451
ALC56_02903
Uncharacterized protein.
  
     0.442
ALC56_08723
Zinc transporter 7.
   
 0.441
ALC56_02723
Zinc transporter 1.
   
 0.440
ALC56_13961
Uncharacterized protein.
  
     0.439
ALC56_06832
Zinc transporter ZIP1.
   
 0.434
ALC56_06833
Zinc transporter ZIP3.
   
 0.434
ALC56_11655
Uncharacterized protein.
  
     0.413
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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