Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALC56_14958Vesicular inhibitory amino acid transporter. (536 aa)    
Predicted Functional Partners:
ALC56_06234
Synaptotagmin 1.
   
 
 0.963
ALC56_09305
Glutamate decarboxylase.
   
 
 0.926
ALC56_02075
Cysteine string protein.
    
 0.923
ALC56_07722
Cysteine sulfinic acid decarboxylase.
   
 
 0.841
ALC56_10871
Cysteine sulfinic acid decarboxylase.
   
 
 0.841
ALC56_06232
Vesicular glutamate transporter 2.
   
  
 0.828
ALC56_04857
Vesicular acetylcholine transporter.
      
 0.810
ALC56_14241
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.789
ALC56_14242
Uncharacterized protein.
   
 
 0.789
ALC56_14243
Regulating synaptic membrane exocytosis protein 1.
   
 
 0.789
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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