STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_14958Vesicular inhibitory amino acid transporter. (536 aa)    
Predicted Functional Partners:
ALC56_14241
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.963
ALC56_14242
Uncharacterized protein.
   
 
 0.963
ALC56_14243
Regulating synaptic membrane exocytosis protein 1.
   
 
 0.963
ALC56_04857
Vesicular acetylcholine transporter.
     
 0.933
ALC56_02236
Synaptic vesicular amine transporter.
     
 0.894
ALC56_02075
Cysteine string protein.
    
 0.842
ALC56_09305
Glutamate decarboxylase.
   
 
 0.803
ALC56_06234
Synaptotagmin 1.
   
 
 0.797
ALC56_02218
Ras-related GTP-binding protein A.
   
 0.796
ALC56_07722
Cysteine sulfinic acid decarboxylase.
   
 
 0.789
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.