Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_14968DUF4817 domain-containing protein. (365 aa)    
Predicted Functional Partners:
ALC56_11813
Uncharacterized protein.
  
     0.502
ALC56_06676
Uncharacterized protein.
  
     0.497
ALC56_06609
Uncharacterized protein.
  
     0.488
ALC56_03029
Uncharacterized protein.
  
     0.482
ALC56_10121
Uncharacterized protein.
  
     0.478
ALC56_00283
Uncharacterized protein.
  
     0.477
ALC56_03523
Uncharacterized protein.
  
     0.475
ALC56_01802
Uncharacterized protein.
  
     0.475
ALC56_15172
Uncharacterized protein.
  
     0.466
ALC56_03124
Uncharacterized protein.
  
     0.462
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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