STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_14045Cell cycle checkpoint protein RAD17. (366 aa)    
Predicted Functional Partners:
ALC56_14774
Replication factor C subunit 5.
   
 0.998
ALC56_10163
Replication factor C subunit 3.
   
 0.998
ALC56_08887
Replication factor C subunit 2.
    
 0.998
ALC56_01255
Replication factor C subunit 4.
   
 0.998
ALC56_02950
Cell cycle checkpoint control protein; Belongs to the rad9 family.
   
 0.997
ALC56_04634
Checkpoint protein HUS1.
   
 0.996
ALC56_10773
Cell cycle checkpoint protein RAD1.
   
 0.995
ALC56_10206
Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
   
 0.993
ALC56_01353
Replication factor C subunit 1.
   
 0.979
ALC56_00580
Replication factor C subunit 1.
   
 0.974
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.