STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_09990Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
ALC56_01448
Set1/Ash2 histone methyltransferase complex subunit ASH2.
   
 0.996
ALC56_04128
Retinoblastoma-binding protein 5.
    
 0.995
ALC56_07285
Histone-lysine N-methyltransferase SETD1B.
   
 
 0.994
ALC56_08858
WD repeat-containing protein 82.
    
 0.979
ALC56_12587
Protein dpy-30 like protein.
    
 0.975
ALC56_04419
WD repeat-containing protein 5.
   
 
 0.925
ALC56_12186
WD repeat-containing protein 16.
    
 
 0.901
ALC56_06710
POC1 centriolar protein like protein A.
    
 
 0.901
ALC56_06711
POC1 centriolar protein like protein B.
    
 
 0.901
ALC56_09191
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.899
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.