STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_09060Protein yellow. (623 aa)    
Predicted Functional Partners:
ALC56_07433
AP complex subunit beta.
    
  0.577
ALC56_14051
AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles.
    
  0.565
ALC56_11748
Cation-independent mannose-6-phosphate receptor.
    
  0.478
ALC56_06222
Putative ATP-dependent RNA helicase DHX34.
    
  0.469
ALC56_03974
AP-1 complex subunit gamma.
    
  0.468
ALC56_15237
AP-3 complex subunit delta-1.
    
  0.464
ALC56_02121
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
    
 0.464
ALC56_04666
Transmembrane emp24 domain-containing protein 7.
   
 
 0.459
ALC56_08736
Uncharacterized protein.
    
 0.447
ALC56_11648
NADH-ubiquinone oxidoreductase chain 4.
    
   0.440
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.