STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_08156Zinc finger CCHC domain-containing protein 2. (873 aa)    
Predicted Functional Partners:
ALC56_15126
Superkiller viralicidic activity 2-like 2.
   
 
 0.573
ALC56_00974
LisH domain-containing protein.
    
 
 0.558
ALC56_14460
PAP-associated domain-containing protein 5.
   
 
 0.554
ALC56_07056
Helicase SKI2W.
   
 
 0.468
ALC56_12744
Ribosome biogenesis protein BRX1 like protein.
   
   0.453
ALC56_00700
Putative rRNA-processing protein EBP2 like protein.
   
   0.453
ALC56_13386
Importin-7.
   
 
 0.444
ALC56_00336
DnaJ like protein subfamily C member 13.
   
  
 0.439
ALC56_02000
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.430
ALC56_12624
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
   0.427
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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