STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_08294Protocadherin Fat 3. (171 aa)    
Predicted Functional Partners:
ALC56_01257
Catenin delta-2.
   
 0.896
ALC56_12935
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.882
ALC56_13103
Suppressor of hairless protein.
    
 0.860
ALC56_00892
Nicastrin.
   
 0.857
ALC56_05188
Protein numb.
    
 0.856
ALC56_09798
Gamma-secretase subunit Aph-1.
     
 0.854
ALC56_14366
Uridine kinase; Belongs to the uridine kinase family.
    
 0.852
ALC56_09447
Armadillo segment polarity protein.
    
 0.852
ALC56_05398
Putative uridine-cytidine kinase.
    
 0.852
ALC56_00359
LIX1-like protein.
   
 0.840
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.