STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_06947DDB1-and CUL4-associated factor 15. (1004 aa)    
Predicted Functional Partners:
ALC56_12640
DNA damage-binding protein 1.
    
 
 0.962
ALC56_11777
RNA-binding protein 39.
    
 
 0.954
ALC56_03585
Cullin-4B; Belongs to the cullin family.
    
 
 0.727
ALC56_13209
Inner nuclear membrane protein Man1.
    
 
 0.685
ALC56_12785
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
   
  
 0.522
ALC56_11943
Uncharacterized protein.
   
   0.474
ALC56_04770
Cytoplasmic aconitate hydratase.
    
 
 0.448
ALC56_05052
ATP synthase subunit d, mitochondrial.
   
 
 0.417
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.