STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_03935Slo-interacting protein 1. (880 aa)    
Predicted Functional Partners:
ALC56_08059
Baculoviral IAP repeat-containing protein 6.
   
 0.962
ALC56_11934
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.927
ALC56_06956
E3 ubiquitin-protein ligase MIB2.
    
 0.917
ALC56_10441
E3 ubiquitin-protein ligase mind-bomb.
    
 0.917
ALC56_01898
Ubiquitin-60S ribosomal protein L40.
    
  0.891
ALC56_11818
Ubiquitin-40S ribosomal protein S27a.
    
 0.884
ALC56_10170
Gamma-glutamylcyclotransferase.
    
 0.884
ALC56_15035
Ubiquitin-like protein 4A.
    
 0.861
ALC56_09977
Polyubiquitin-A.
    
 0.861
ALC56_13257
Polyubiquitin-A.
    
 0.861
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.