STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_03936Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
ALC56_14288
Protein lin-52 like protein.
    
 0.491
ALC56_00474
Protein lin-54 like protein.
    
 0.486
ALC56_11244
Putative histone-binding protein Caf1.
    
 0.476
ALC56_07442
Protein lin-9 like protein.
    
 0.470
ALC56_03549
Transcription factor E2F5.
    
 0.465
ALC56_15256
Replication protein A 32 kDa subunit.
    
 0.462
ALC56_15258
Uncharacterized protein.
    
 0.462
ALC56_14326
Xylosyltransferase oxt.
    
 0.461
ALC56_00305
Transcription factor Dp-1.
    
  0.459
ALC56_11401
Retinoblastoma-like protein 1.
    
  0.457
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.