STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_00096Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
ALC56_11934
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.721
ALC56_11260
Suppressor of fused homolog.
    
 0.620
ALC56_07743
Lysine-specific demethylase 6A.
    
 0.589
ALC56_15051
Chromodomain-helicase-DNA-binding protein Mi-2 like protein.
   
 0.588
ALC56_08492
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.573
ALC56_04998
Mitogen-activated protein-binding protein-interacting protein.
    
 0.565
ALC56_07797
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
  0.564
ALC56_06222
Putative ATP-dependent RNA helicase DHX34.
    
 0.561
ALC56_07091
General transcription factor 3C polypeptide 5.
    
 0.560
ALC56_11540
Nuclear receptor subfamily 2 group E member 1.
   
 0.559
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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