STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_14593Ligatin. (579 aa)    
Predicted Functional Partners:
ALC56_02181
Guanine nucleotide-binding protein subunit beta-like protein.
    
   0.916
ALC56_11310
40S ribosomal protein S4.
    
 
 0.914
ALC56_00981
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
 
 0.912
ALC56_07831
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.867
ALC56_13040
40S ribosomal protein S20.
    
   0.863
ALC56_08963
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
   0.863
ALC56_04326
40S ribosomal protein S17.
    
   0.860
ALC56_13020
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
 
 0.859
ALC56_08210
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
    
   0.855
ALC56_05012
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
   0.855
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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