Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_14186Protein toll; Belongs to the Toll-like receptor family. (1175 aa)    
Predicted Functional Partners:
ALC56_02437
Myeloid differentiation primary response protein MyD88.
    
 0.985
ALC56_09027
Protein spaetzle.
    
 0.980
ALC56_04193
Spaetzle domain-containing protein.
    
 0.949
ALC56_05219
TNF receptor-associated factor 6.
   
 0.869
ALC56_10623
Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.815
ALC56_11934
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.792
ALC56_12737
Calcium homeostasis endoplasmic reticulum protein.
    
  0.790
ALC56_04666
Transmembrane emp24 domain-containing protein 7.
    
 0.770
ALC56_14259
Mitogen-activated protein kinase kinase kinase 7.
    
 0.760
ALC56_13061
Protein spaetzle.
    
 0.759
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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