STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_14083DEAD-box helicase Dbp80. (481 aa)    
Predicted Functional Partners:
ALC56_02441
Uncharacterized protein.
    
 0.953
ALC56_04488
Nucleoporin GLE1.
    
 0.953
ALC56_02118
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.925
ALC56_00792
Guanine nucleotide-binding protein-like 3 like protein.
  
 0.882
ALC56_00700
Putative rRNA-processing protein EBP2 like protein.
   
 0.871
ALC56_00475
Splicing factor 3B subunit 1.
   
 0.843
ALC56_15126
Superkiller viralicidic activity 2-like 2.
   
 0.829
ALC56_00449
Nucleolar protein 58.
  
 
 0.829
ALC56_12737
Calcium homeostasis endoplasmic reticulum protein.
   
 0.814
ALC56_03192
Pre-mRNA-processing factor 6.
    
 0.812
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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