Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_13568Uncharacterized protein. (57 aa)    
Predicted Functional Partners:
ALC56_14241
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.945
ALC56_14242
Uncharacterized protein.
   
 
 0.945
ALC56_14243
Regulating synaptic membrane exocytosis protein 1.
   
 
 0.945
ALC56_14304
Protein piccolo.
    
 
 0.853
ALC56_14305
RING-type domain-containing protein.
    
 
 0.853
ALC56_12065
Fanconi anemia group M protein.
    
 
 0.827
ALC56_01523
Rho-GAP domain-containing protein.
    
 
 0.751
ALC56_10805
Uncharacterized protein C22orf9 like protein.
    
 
 0.728
ALC56_03960
Liprin-alpha-2.
    
 
 0.702
ALC56_03965
Liprin-alpha-3.
    
 
 0.702
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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