STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_13568Uncharacterized protein. (57 aa)    
Predicted Functional Partners:
ALC56_14241
Regulating synaptic membrane exocytosis protein 2.
    
 
 0.886
ALC56_14242
Uncharacterized protein.
    
 
 0.886
ALC56_14243
Regulating synaptic membrane exocytosis protein 1.
    
 
 0.886
ALC56_14304
Protein piccolo.
    
 
 0.759
ALC56_14305
RING-type domain-containing protein.
    
 
 0.759
ALC56_03960
Liprin-alpha-2.
    
 
 0.550
ALC56_03965
Liprin-alpha-3.
    
 
 0.550
ALC56_03362
Kazrin.
    
 
 0.550
ALC56_07407
RIMS-binding protein 2.
   
 
 0.520
ALC56_01523
Rho-GAP domain-containing protein.
    
 
 0.510
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.