STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_13135Corepressor interacting with RBPJ 1. (365 aa)    
Predicted Functional Partners:
ALC56_14770
Pre-mRNA-splicing factor CWC25 like protein.
   
 
 0.944
ALC56_00434
Puff-specific protein Bx42.
   
 
 0.937
ALC56_13103
Suppressor of hairless protein.
    
 0.927
ALC56_04227
Histone deacetylase complex subunit SAP30 like protein.
    
 0.918
ALC56_15260
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 
 0.903
ALC56_02371
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.880
ALC56_02287
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.880
ALC56_05760
Paired amphipathic helix protein Sin3a.
   
 
 0.857
ALC56_06891
Pre-mRNA-processing-splicing factor 8.
    
 
 0.831
ALC56_08456
Nuclear receptor corepressor 1.
    
 0.797
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.