STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_12172Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
ALC56_03917
Uncharacterized protein.
   
 
 0.993
ALC56_02447
Cell division cycle 5-related protein.
    
 
 0.993
ALC56_11717
Peptidyl-prolyl cis-trans isomerase CWC27 like protein.
    
 0.989
ALC56_07643
Pre-mRNA-splicing factor CWC22 like protein.
    
 0.988
ALC56_03408
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
    
 0.986
ALC56_00978
Pre-mRNA-processing factor 19.
    
 
 0.986
ALC56_11411
Pre-mRNA-processing factor 17.
    
 0.980
ALC56_08170
Splicing factor 3B subunit 2.
    
 
 0.970
ALC56_10481
BUD13 like protein.
    
 
 0.966
ALC56_05351
Splicing factor 3A subunit 2.
    
 
 0.962
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.