STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_12163Synaptobrevin. (150 aa)    
Predicted Functional Partners:
ALC56_13833
Syntaxin; Belongs to the syntaxin family.
    
 0.993
ALC56_12663
Syntaxin-8.
    
 0.983
ALC56_14903
Soluble NSF attachment protein.
    
 0.982
ALC56_13749
Syntaxin-5; Belongs to the syntaxin family.
    
 0.982
ALC56_00126
Protein ROP; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.981
ALC56_06806
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.980
ALC56_11663
Synaptosomal-associated protein 29.
   
 0.975
ALC56_07948
Uncharacterized protein.
    
 0.974
ALC56_01798
Vesicle transport through interaction with t-SNAREs like protein 1A.
   
 0.974
ALC56_04120
Vesicle transport through interaction with t-SNAREs like protein 1B.
   
 0.971
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.