STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_12196NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial. (179 aa)    
Predicted Functional Partners:
ALC56_15058
Uncharacterized protein.
   
 0.999
ALC56_09465
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10.
   
 0.999
ALC56_06664
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.
   
 0.999
ALC56_03827
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Belongs to the complex I LYR family.
   
 0.999
ALC56_15223
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial.
   
 0.999
ALC56_14332
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial.
   
 0.999
ALC56_13932
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
 0.999
ALC56_13129
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
   
 0.999
ALC56_11985
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 0.999
ALC56_11763
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 0.999
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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