STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_11305PDZ and LIM domain protein Zasp. (406 aa)    
Predicted Functional Partners:
ALC56_05518
Uncharacterized protein.
   
    0.792
ALC56_11934
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.781
ALC56_04893
Intraflagellar transport protein 57 like protein.
    
 0.781
ALC56_12337
Peripheral plasma membrane protein CASK.
    
 0.775
ALC56_12345
Peripheral plasma membrane protein CASK.
    
 0.775
ALC56_12338
Peripheral plasma membrane protein CASK.
    
 0.775
ALC56_12344
Peripheral plasma membrane protein CASK.
    
 0.775
ALC56_02847
Partitioning defective 6 like protein gamma.
    
 0.766
ALC56_13648
Intraflagellar transport protein 80 like protein.
    
 0.766
ALC56_10980
TRAF3-interacting protein 1.
    
 0.763
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.