STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_10659Chitin-binding type-2 domain-containing protein. (180 aa)    
Predicted Functional Partners:
ALC56_02447
Cell division cycle 5-related protein.
   
 0.962
ALC56_00475
Splicing factor 3B subunit 1.
   
 
 0.938
ALC56_07117
Splicing factor 3B subunit 3.
   
 0.937
ALC56_08194
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.933
ALC56_00299
Splicing factor 3B subunit 4.
   
 
 0.932
ALC56_11158
Uncharacterized protein.
   
 
 0.929
ALC56_14398
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.927
ALC56_07939
PHD finger-like domain-containing protein 5A.
   
 
 0.926
ALC56_00393
Pre-mRNA branch site p14-like protein.
   
 
 0.924
ALC56_08170
Splicing factor 3B subunit 2.
   
 
 0.920
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.