STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_10510E3 ubiquitin-protein ligase MARCH3. (164 aa)    
Predicted Functional Partners:
ALC56_01615
CCR4-NOT transcription complex subunit 2.
    
 
 0.757
ALC56_14890
Peptidylprolyl isomerase.
    
 
 0.727
ALC56_12298
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
    
 
 0.726
ALC56_04888
Spermatogenesis-associated protein 5.
    
 
 0.726
ALC56_15049
FAS-associated factor 2-B.
    
 
 0.717
ALC56_15127
FAS-associated factor 1.
    
 
 0.717
ALC56_01530
Ubiquitin-conjugating enzyme E2 J2.
    
 
 0.715
ALC56_06882
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.588
ALC56_01207
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.546
ALC56_03390
Peptidylprolyl isomerase.
   
 
 0.486
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.