STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_10468Calpain-7; Belongs to the peptidase C2 family. (825 aa)    
Predicted Functional Partners:
ALC56_12986
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
 
 0.923
ALC56_07933
Sorbin and SH3 domain-containing protein 1.
    
   0.918
ALC56_07417
Programmed cell death protein 6.
   
 0.875
ALC56_05727
Uncharacterized protein.
   
 0.875
ALC56_02668
Peflin.
   
 0.875
ALC56_04343
U3 small nucleolar RNA-associated protein 15 like protein.
   
    0.758
ALC56_01794
Talin-1.
    
 0.749
ALC56_13880
Methenyltetrahydrofolate synthase domain-containing protein.
   
    0.744
ALC56_12067
Histone chaperone asf1.
   
    0.744
ALC56_15056
WD repeat-containing protein 6.
   
    0.734
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.