STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_08448SURP and G-patch domain-containing protein 1. (817 aa)    
Predicted Functional Partners:
ALC56_09359
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.994
ALC56_04033
RNA-binding protein 5.
   
 0.976
ALC56_13019
Splicing factor 45.
   
 
 0.961
ALC56_08408
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.950
ALC56_08599
Splicing factor 1.
   
 0.798
ALC56_05252
Dosage compensation regulator.
    
 0.798
ALC56_00688
Uncharacterized protein.
    
 0.789
ALC56_13964
RNA-binding protein 25.
   
 
 0.754
ALC56_02798
Serine/threonine-protein phosphatase 1 regulatory subunit 10.
   
 0.742
ALC56_11777
RNA-binding protein 39.
   
  0.726
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.