STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_08800Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
ALC56_09359
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.978
ALC56_04964
RNA helicase.
    
 0.958
ALC56_01826
Uncharacterized protein.
    
 
 0.948
ALC56_07427
Nucleolar protein 6.
   
 
 0.946
ALC56_02290
Bystin.
    
 
 0.945
ALC56_00472
U3 small nucleolar RNA-associated protein 6 like protein.
    
 
 0.942
ALC56_14089
Something about silencing protein 10.
    
   0.941
ALC56_12617
Nucleolar MIF4G domain-containing protein 1.
    
   0.941
ALC56_13013
Nucleolar protein 14.
    
   0.941
ALC56_11962
Digestive organ expansion factor like protein.
    
   0.941
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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