STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_07406Uncharacterized protein. (362 aa)    
Predicted Functional Partners:
ALC56_11934
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.988
ALC56_08858
WD repeat-containing protein 82.
    
 0.978
ALC56_03386
Protein phosphatase 1 regulatory subunit 12A.
  
 0.974
ALC56_01541
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.972
ALC56_03591
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.966
ALC56_11076
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.965
ALC56_11711
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.959
ALC56_12986
Leucine-rich repeat and guanylate kinase domain-containing protein.
   
 0.957
ALC56_05887
Protein phosphatase 1 regulatory subunit 7.
   
 0.956
ALC56_01543
WD repeat-containing protein 33.
   
 0.956
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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