STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_07052Odorant receptor Or2. (726 aa)    
Predicted Functional Partners:
ALC56_14326
Xylosyltransferase oxt.
    
 0.533
ALC56_03226
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
  0.521
ALC56_07667
CREB-binding protein.
   
  0.480
ALC56_14902
Uncharacterized protein C16orf73 like protein.
   
 0.476
ALC56_15256
Replication protein A 32 kDa subunit.
    
  0.471
ALC56_15258
Uncharacterized protein.
    
  0.471
ALC56_13991
Spindle assembly abnormal protein 6 like protein.
    
  0.471
ALC56_06246
DNA repair endonuclease XPF.
    
  0.466
ALC56_07442
Protein lin-9 like protein.
    
 0.457
ALC56_06807
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.444
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.