STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC56_06871Uncharacterized protein. (422 aa)    
Predicted Functional Partners:
ALC56_01968
Vacuolar protein sorting-associated protein 28 like protein; Belongs to the VPS28 family.
   
 0.999
ALC56_08475
Vacuolar protein sorting-associated protein 37B.
    
 0.998
ALC56_10572
Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.
    
 0.989
ALC56_04245
Multivesicular body subunit 12B.
    
 0.989
ALC56_00844
Vacuolar protein sorting-associated protein 37A.
   
 0.988
ALC56_10643
Vacuolar protein-sorting-associated protein 36.
    
 0.987
ALC56_15054
Targeting protein for Xklp2.
    
 0.985
ALC56_11818
Ubiquitin-40S ribosomal protein S27a.
    
 0.984
ALC56_00895
Zinc finger FYVE domain-containing protein 1.
    
 0.979
ALC56_01898
Ubiquitin-60S ribosomal protein L40.
    
 0.977
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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