Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC56_00844 | ALC56_00895 | A0A195FWM3 | A0A195FYI9 | Vacuolar protein sorting-associated protein 37A. | Zinc finger FYVE domain-containing protein 1. | 0.735 |
ALC56_00844 | ALC56_01968 | A0A195FWM3 | A0A195FTF7 | Vacuolar protein sorting-associated protein 37A. | Vacuolar protein sorting-associated protein 28 like protein; Belongs to the VPS28 family. | 0.992 |
ALC56_00844 | ALC56_04245 | A0A195FWM3 | A0A195FKA0 | Vacuolar protein sorting-associated protein 37A. | Multivesicular body subunit 12B. | 0.991 |
ALC56_00844 | ALC56_06871 | A0A195FWM3 | A0A195FF75 | Vacuolar protein sorting-associated protein 37A. | Uncharacterized protein. | 0.988 |
ALC56_00844 | ALC56_08475 | A0A195FWM3 | A0A195F9F8 | Vacuolar protein sorting-associated protein 37A. | Vacuolar protein sorting-associated protein 37B. | 0.920 |
ALC56_00844 | ALC56_10572 | A0A195FWM3 | A0A195F4K1 | Vacuolar protein sorting-associated protein 37A. | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | 0.749 |
ALC56_00844 | ALC56_10643 | A0A195FWM3 | A0A195F392 | Vacuolar protein sorting-associated protein 37A. | Vacuolar protein-sorting-associated protein 36. | 0.887 |
ALC56_00844 | ALC56_15054 | A0A195FWM3 | A0A151JST1 | Vacuolar protein sorting-associated protein 37A. | Targeting protein for Xklp2. | 0.738 |
ALC56_00895 | ALC56_00844 | A0A195FYI9 | A0A195FWM3 | Zinc finger FYVE domain-containing protein 1. | Vacuolar protein sorting-associated protein 37A. | 0.735 |
ALC56_00895 | ALC56_01898 | A0A195FYI9 | A0A195FT85 | Zinc finger FYVE domain-containing protein 1. | Ubiquitin-60S ribosomal protein L40. | 0.889 |
ALC56_00895 | ALC56_01968 | A0A195FYI9 | A0A195FTF7 | Zinc finger FYVE domain-containing protein 1. | Vacuolar protein sorting-associated protein 28 like protein; Belongs to the VPS28 family. | 0.834 |
ALC56_00895 | ALC56_04245 | A0A195FYI9 | A0A195FKA0 | Zinc finger FYVE domain-containing protein 1. | Multivesicular body subunit 12B. | 0.750 |
ALC56_00895 | ALC56_06871 | A0A195FYI9 | A0A195FF75 | Zinc finger FYVE domain-containing protein 1. | Uncharacterized protein. | 0.979 |
ALC56_00895 | ALC56_08475 | A0A195FYI9 | A0A195F9F8 | Zinc finger FYVE domain-containing protein 1. | Vacuolar protein sorting-associated protein 37B. | 0.735 |
ALC56_00895 | ALC56_10643 | A0A195FYI9 | A0A195F392 | Zinc finger FYVE domain-containing protein 1. | Vacuolar protein-sorting-associated protein 36. | 0.817 |
ALC56_00895 | ALC56_11818 | A0A195FYI9 | A0A151JTF5 | Zinc finger FYVE domain-containing protein 1. | Ubiquitin-40S ribosomal protein S27a. | 0.917 |
ALC56_01898 | ALC56_00895 | A0A195FT85 | A0A195FYI9 | Ubiquitin-60S ribosomal protein L40. | Zinc finger FYVE domain-containing protein 1. | 0.889 |
ALC56_01898 | ALC56_01968 | A0A195FT85 | A0A195FTF7 | Ubiquitin-60S ribosomal protein L40. | Vacuolar protein sorting-associated protein 28 like protein; Belongs to the VPS28 family. | 0.727 |
ALC56_01898 | ALC56_06871 | A0A195FT85 | A0A195FF75 | Ubiquitin-60S ribosomal protein L40. | Uncharacterized protein. | 0.977 |
ALC56_01898 | ALC56_10572 | A0A195FT85 | A0A195F4K1 | Ubiquitin-60S ribosomal protein L40. | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | 0.896 |
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